Create climatology — create_climatology • dhw

Function to calculate climatology from datasets

See vignette for further details outputs:

output$sst
output$anomalies
output$mm
output$mmm
output$dailyclimatology
output$hs
output$dhw

note - calculating BAA is slow

Usage

create_climatology(
  sst_file,
  anomaly = 1,
  window = 84,
  quiet = FALSE,
  return = FALSE,
  baa = FALSE,
  save_output = NULL,
  climatology = NULL,
  ...
)

Arguments

sst_file: input
window: number of days for the DHW sum (12 weeks = 84 days default)
quiet: verbose - update with messages?
return: return output TRUE/FALSE
baa: return baa? TRUE/FALSE (speeds up processing)
save_output: save output? "folder/filename" format where "folder/filename_sst.tif", "folder/filename_dhw.tif" etc
climatology: replace mmm with external climatology? link to .nc, explicit for CRW (i.e. "GBR_ct5km_climatology_v3.1.nc")

Value

output list (see above for details)

Examples

if (FALSE) { # \dontrun{
output <- create_climatology("crw.nc")
} # }